Package: treeDA
Title: Tree-Based Discriminant Analysis
Version: 0.0.5
Authors@R: person("Julia", "Fukuyama", email = "julia.fukuyama@gmail.com",
    role = c("aut", "cre"))
Description: Performs sparse discriminant analysis on a combination of
        node and leaf predictors when the predictor variables are
        structured according to a tree, as described in Fukuyama et al.
        (2017) <doi:10.1371/journal.pcbi.1005706>.
Depends: R (>= 3.4.0)
Imports: sparseLDA (>= 0.1.9), Matrix (>= 1.2.10), mvtnorm (>= 1.0.6),
        reshape2 (>= 1.4.2), gtable (>= 0.2.0), phyloseq (>= 1.22.3),
        ggplot2 (>= 2.2.1), ape (>= 5.1), grid, stats
Suggests: adaptiveGPCA (>= 0.1), knitr (>= 1.16), testthat (>= 2.0.0),
        markdown, rmarkdown
VignetteBuilder: knitr
License: GPL-2
biocViews:
URL: https://github.com/jfukuyama/treeda
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.1.0
Config/pak/sysreqs: libglpk-dev libicu-dev libxml2-dev zlib1g-dev
Repository: https://jfukuyama.r-universe.dev
Date/Publication: 2021-05-14 19:39:20 UTC
RemoteUrl: https://github.com/jfukuyama/treeda
RemoteRef: HEAD
RemoteSha: 86ae334c34a5ee5f3150ce8a4abc21d216032e70
NeedsCompilation: no
Packaged: 2026-10-19 11:49:33 UTC; root
Author: Julia Fukuyama [aut, cre]
Maintainer: Julia Fukuyama <julia.fukuyama@gmail.com>